1.gwas.txt

2.config.txt

Note: 10 rows of below are the head content in config.txt

#### CONFIG file for use with MANH++ - Do not modify the first 10 lines
## min.count: The lower cell count threshold to accept this config
## max.count: The upper cell count threshold to accept this config
## maf: Is MAF detection active for this config - is there any variants within a cell with MAF < threshold?
## conseq: Is HIGH impact consequence active? Are there any variants with HIGH impact consequence in the cell?
## col: The colour which cells for this config
## idx: the index to use for this cell in the heatmap - MUST BE CONSECUTIVE FROM START TO END - STARTING AT 1
"## type: val - an config entry, oddchr - the odd chromosome, evenchr - the even chromosome"
## report: Are these annotations labeled on the heatmap
#####

3.snp.txt